![]() ![]() When the microscope creates an image of an object, it convolves the object with its point spread function of limited resolution. Huygens from SVI is a software for the deconvolution of microscope image data. The latest Version of the LAS X Software can also be downloaded from the Leica-Microsystems website. ![]() Without the dongles the software runs but only basic features are available. We also have the installation file available. To run the full package on your computer, you need two USB dongles which you can borrow for hours or a few days from the Core Facility Bioimaging. The same software package that is used for recording the images on the Leica microscope is also available as separate software, with full analysis and 3D-visualization capability. 32-bit versions cannot address more than about 1.4 GB of RAM and thus cannot open larger images. (In a German Windows, copy Systemsteuerung\System und Sicherheit\System in the address line of the Windows Explorer). Under Windows, this information can be found under 'system' in the control panel. ![]() For Windows and Linux you need to know whether you run a 32 or a 64 bit system. Simply unpack the zip file and copy the folder to a location were you have write access. No installation is required, and thus no administrator rights on the computer. To download Fiji, please go to the Fiji home page. There is a large community of supporters out there and macros or plug-ins for many problems are freely available.įiji is available for Windows, Mac and Linux. On the other hand some things such as 3D visualization appear to be still much simpler to do with commercial software. Commercial packages can be easily over €10000 per license and are thus a major investment. So you don't loose the knowledge you develop during its usage. lif file format as well as formats of other commercial microscope software.Ī huge practical advantage in particular for young scientists is that it is public domain, meaning you can be sure that you also can use it in the next group you will be working. One of those is the LOCI bioformats reader which allows opening of the native Leica. Fiji / ImageJįiji is a distribution of ImageJ which has a lot of plugins needed for microscope images already included. ¹This subreddit is not affiliated with the creators of ImageJ or FIJI, but is simply a place to share ideas, papers, resources, and expertise - especially as relate to questions & answers posted here.The following software for image analysis is available through or recommended by the Core Facility Bioimaging. Sign-up for one of the mailing lists: /Mailing_Lists It also hosts a forum for interacting with the developers.įIJI Is Just ImageJ - "a distribution of ImageJ (and ImageJ2) together with Java, Java3D and a lot of plugins organized into a coherent menu structure." is full of ImageJ development and analysis resources. Image analysis is interdisciplinary, so clearly explain field-specific terms or jargon. Clearly explain what you are trying to learn, not just the method used, to avoid the XY problem. Provide details: Be thorough in outlining the question(s) that you are trying to answer.People from the future may be stuck trying to answer the same question. Report spam or content that is hateful or off-topic.Upvote those who contribute to the discussion and provide freely of their time to assist you.Projects: Share a Link to your pet image analysis project.Research: Links to published (articles in scientific journals or in established repositories) that utilize ImageJ/FIJI for image analysis or are about image analysis.Discussions: Text posts, meant to ask about general issues relating to image analysis.Image analyst job posts are also welcome. Tips: Text or Link posts to share useful how-to tricks and discoveries on using ImageJ/FIJI.Questions which have been Solved will be marked as such. This could include algorithms, microscopy and scientific imaging, plug-ins, methods, and specific features of the software. ![]()
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |